ol-bibtex.el (34527B)
1 ;;; ol-bibtex.el --- Links to BibTeX entries -*- lexical-binding: t; -*- 2 ;; 3 ;; Copyright (C) 2007-2024 Free Software Foundation, Inc. 4 ;; 5 ;; Authors: Bastien Guerry <bzg@gnu.org> 6 ;; Carsten Dominik <carsten dot dominik at gmail dot com> 7 ;; Eric Schulte <schulte dot eric at gmail dot com> 8 ;; Keywords: org, text, capture 9 ;; 10 ;; This file is part of GNU Emacs. 11 ;; 12 ;; GNU Emacs is free software: you can redistribute it and/or modify 13 ;; it under the terms of the GNU General Public License as published by 14 ;; the Free Software Foundation, either version 3 of the License, or 15 ;; (at your option) any later version. 16 17 ;; GNU Emacs is distributed in the hope that it will be useful, 18 ;; but WITHOUT ANY WARRANTY; without even the implied warranty of 19 ;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 20 ;; GNU General Public License for more details. 21 22 ;; You should have received a copy of the GNU General Public License 23 ;; along with GNU Emacs. If not, see <https://www.gnu.org/licenses/>. 24 ;; 25 ;;; Commentary: 26 ;; 27 ;; This file implements links to database entries in BibTeX files. 28 ;; Instead of defining a special link prefix, it uses the normal file 29 ;; links combined with a custom search mechanism to find entries 30 ;; by reference key. And it constructs a nice description tag for 31 ;; the link that contains the author name, the year and a short title. 32 ;; 33 ;; It also stores detailed information about the entry so that 34 ;; capture templates can access and enter this information easily. 35 ;; 36 ;; The available properties for each entry are listed here: 37 ;; 38 ;; :author :publisher :volume :pages 39 ;; :editor :url :number :journal 40 ;; :title :year :series :address 41 ;; :booktitle :month :annote :abstract 42 ;; :key :btype 43 ;; 44 ;; Here is an example of a capture template that use some of this 45 ;; information (:author :year :title :journal :pages): 46 ;; 47 ;; (setq org-capture-templates 48 ;; '((?b "* READ %?\n\n%a\n\n%:author (%:year): %:title\n \ 49 ;; In %:journal, %:pages."))) 50 ;; 51 ;; Let's say you want to capture this BibTeX entry: 52 ;; 53 ;; @Article{dolev83, 54 ;; author = {Danny Dolev and Andrew C. Yao}, 55 ;; title = {On the security of public-key protocols}, 56 ;; journal = {IEEE Transaction on Information Theory}, 57 ;; year = 1983, 58 ;; volume = 2, 59 ;; number = 29, 60 ;; pages = {198--208}, 61 ;; month = {Mars} 62 ;; } 63 ;; 64 ;; M-x `org-capture' on this entry will produce this buffer: 65 ;; 66 ;; ===================================================================== 67 ;; * READ <== [point here] 68 ;; 69 ;; [[file:file.bib::dolev83][Dolev & Yao 1983: security of public key protocols]] 70 ;; 71 ;; Danny Dolev and Andrew C. Yao (1983): On the security of public-key protocols 72 ;; In IEEE Transaction on Information Theory, 198--208. 73 ;; ===================================================================== 74 ;; 75 ;; Additionally, the following functions are now available for storing 76 ;; bibtex entries within Org documents. 77 ;; 78 ;; - Run `org-bibtex' to export the current file to a .bib. 79 ;; 80 ;; - Run `org-bibtex-check' or `org-bibtex-check-all' to check and 81 ;; fill in missing field of either the current, or all headlines 82 ;; 83 ;; - Run `org-bibtex-create' to add a bibtex entry 84 ;; 85 ;; - Use `org-bibtex-read' to read a bibtex entry after `point' or in 86 ;; the active region, then call `org-bibtex-write' in a .org file to 87 ;; insert a heading for the read bibtex entry 88 ;; 89 ;; - All BibTeX information is taken from the document compiled by 90 ;; Andrew Roberts from the BibTeX manual, available at 91 ;; https://www.andy-roberts.net/res/writing/latex/bibentries.pdf 92 ;; 93 ;;; History: 94 ;; 95 ;; The link creation part has been part of Org for a long time. 96 ;; 97 ;; Creating better capture template information was inspired by a request 98 ;; of Austin Frank: https://orgmode.org/list/m0myu03vbx.fsf@gmail.com 99 ;; and then implemented by Bastien Guerry. 100 ;; 101 ;; Eric Schulte eventually added the functions for translating between 102 ;; Org headlines and BibTeX entries, and for fleshing out the BibTeX 103 ;; fields of existing Org headlines. 104 ;; 105 ;; Org mode loads this module by default - if this is not what you want, 106 ;; configure the variable `org-modules'. 107 108 ;;; Code: 109 110 (require 'org-macs) 111 (org-assert-version) 112 113 (require 'bibtex) 114 (require 'cl-lib) 115 (require 'org-compat) 116 (require 'org-macs) 117 (require 'ol) 118 119 (defvar org-agenda-overriding-header) 120 (defvar org-agenda-search-view-always-boolean) 121 (defvar org-bibtex-description nil) 122 (defvar org-id-locations) 123 (defvar org-property-end-re) 124 (defvar org-special-properties) 125 (defvar org-window-config-before-follow-link) 126 127 (declare-function bibtex-beginning-of-entry "bibtex" ()) 128 (declare-function bibtex-generate-autokey "bibtex" ()) 129 (declare-function bibtex-parse-entry "bibtex" (&optional content)) 130 (declare-function bibtex-url "bibtex" (&optional pos no-browse)) 131 132 (declare-function org-back-to-heading "org" (&optional invisible-ok)) 133 (declare-function org-entry-get "org" (pom property &optional inherit literal-nil)) 134 (declare-function org-entry-properties "org" (&optional pom which)) 135 (declare-function org-get-tags "org" (&optional pos local)) 136 (declare-function org-heading-components "org" ()) 137 (declare-function org-insert-heading "org" (&optional arg invisible-ok top)) 138 (declare-function org-map-entries "org" (func &optional match scope &rest skip)) 139 (declare-function org-narrow-to-subtree "org" (&optional element)) 140 (declare-function org-set-property "org" (property value)) 141 (declare-function org-toggle-tag "org" (tag &optional onoff)) 142 (declare-function org-indent-region "org" (start end)) 143 144 (declare-function org-search-view "org-agenda" (&optional todo-only string edit-at)) 145 146 147 ;;; BibTeX data 148 (defvar org-bibtex-types 149 '((:article 150 (:description . "An article from a journal or magazine") 151 (:required :author :title :journal :year) 152 (:optional :volume :number :pages :month :note :doi)) 153 (:book 154 (:description . "A book with an explicit publisher") 155 (:required (:editor :author) :title :publisher :year) 156 (:optional (:volume :number) :series :address :edition :month :note :doi)) 157 (:booklet 158 (:description . "A work that is printed and bound, but without a named publisher or sponsoring institution.") 159 (:required :title) 160 (:optional :author :howpublished :address :month :year :note :doi :url)) 161 (:conference 162 (:description . "") 163 (:required :author :title :booktitle :year) 164 (:optional :editor :pages :organization :publisher :address :month :note :doi :url)) 165 (:inbook 166 (:description . "A part of a book, which may be a chapter (or section or whatever) and/or a range of pages.") 167 (:required (:author :editor) :title (:chapter :pages) :publisher :year) 168 (:optional :crossref (:volume :number) :series :type :address :edition :month :note :doi)) 169 (:incollection 170 (:description . "A part of a book having its own title.") 171 (:required :author :title :booktitle :publisher :year) 172 (:optional :crossref :editor (:volume :number) :series :type :chapter :pages :address :edition :month :note :doi)) 173 (:inproceedings 174 (:description . "An article in a conference proceedings") 175 (:required :author :title :booktitle :year) 176 (:optional :crossref :editor (:volume :number) :series :pages :address :month :organization :publisher :note :doi)) 177 (:manual 178 (:description . "Technical documentation.") 179 (:required :title) 180 (:optional :author :organization :address :edition :month :year :note :doi :url)) 181 (:mastersthesis 182 (:description . "A Master’s thesis.") 183 (:required :author :title :school :year) 184 (:optional :type :address :month :note :doi :url)) 185 (:misc 186 (:description . "Use this type when nothing else fits.") 187 (:required) 188 (:optional :author :title :howpublished :month :year :note :doi :url)) 189 (:phdthesis 190 (:description . "A PhD thesis.") 191 (:required :author :title :school :year) 192 (:optional :type :address :month :note :doi :url)) 193 (:proceedings 194 (:description . "The proceedings of a conference.") 195 (:required :title :year) 196 (:optional :editor (:volume :number) :series :address :month :organization :publisher :note :doi)) 197 (:techreport 198 (:description . "A report published by a school or other institution.") 199 (:required :author :title :institution :year) 200 (:optional :type :address :month :note :doi :url)) 201 (:unpublished 202 (:description . "A document having an author and title, but not formally published.") 203 (:required :author :title :note) 204 (:optional :month :year :doi :url))) 205 "BibTeX entry types with required and optional parameters.") 206 207 (defvar org-bibtex-fields 208 '((:address . "Usually the address of the publisher or other type of institution. For major publishing houses, van Leunen recommends omitting the information entirely. For small publishers, on the other hand, you can help the reader by giving the complete address.") 209 (:annote . "An annotation. It is not used by the standard bibliography styles, but may be used by others that produce an annotated bibliography.") 210 (:author . "The name(s) of the author(s), in the format described in the LaTeX book. Remember, all names are separated with the and keyword, and not commas.") 211 (:booktitle . "Title of a book, part of which is being cited. See the LaTeX book for how to type titles. For book entries, use the title field instead.") 212 (:chapter . "A chapter (or section or whatever) number.") 213 (:crossref . "The database key of the entry being cross referenced.") 214 (:doi . "The digital object identifier.") 215 (:edition . "The edition of a book for example, 'Second'. This should be an ordinal, and should have the first letter capitalized, as shown here; the standard styles convert to lower case when necessary.") 216 (:editor . "Name(s) of editor(s), typed as indicated in the LaTeX book. If there is also an author field, then the editor field gives the editor of the book or collection in which the reference appears.") 217 (:howpublished . "How something strange has been published. The first word should be capitalized.") 218 (:institution . "The sponsoring institution of a technical report.") 219 (:journal . "A journal name.") 220 (:key . "Used for alphabetizing, cross-referencing, and creating a label when the author information is missing. This field should not be confused with the key that appears in the \\cite command and at the beginning of the database entry.") 221 (:month . "The month in which the work was published or, for an unpublished work, in which it was written. You should use the standard three-letter abbreviation,") 222 (:note . "Any additional information that can help the reader. The first word should be capitalized.") 223 (:number . "Any additional information that can help the reader. The first word should be capitalized.") 224 (:organization . "The organization that sponsors a conference or that publishes a manual.") 225 (:pages . "One or more page numbers or range of numbers, such as 42-111 or 7,41,73-97 or 43+ (the ‘+’ in this last example indicates pages following that don’t form simple range). BibTEX requires double dashes for page ranges (--).") 226 (:publisher . "The publisher’s name.") 227 (:school . "The name of the school where a thesis was written.") 228 (:series . "The name of a series or set of books. When citing an entire book, the title field gives its title and an optional series field gives the name of a series or multi-volume set in which the book is published.") 229 (:title . "The work’s title, typed as explained in the LaTeX book.") 230 (:type . "The type of a technical report for example, 'Research Note'.") 231 (:url . "Uniform resource locator.") 232 (:volume . "The volume of a journal or multi-volume book.") 233 (:year . "The year of publication or, for an unpublished work, the year it was written. Generally it should consist of four numerals, such as 1984, although the standard styles can handle any year whose last four nonpunctuation characters are numerals, such as '(about 1984)'")) 234 "BibTeX fields with descriptions.") 235 236 (defvar org-bibtex-entries nil 237 "List to hold parsed bibtex entries.") 238 239 (defgroup org-bibtex nil 240 "Options for translating between Org headlines and BibTeX entries." 241 :tag "Org BibTeX" 242 :group 'org) 243 244 (defcustom org-bibtex-autogen-keys nil 245 "Set to a truth value to use `bibtex-generate-autokey' to generate keys." 246 :group 'org-bibtex 247 :version "24.1" 248 :type 'boolean) 249 250 (defcustom org-bibtex-prefix nil 251 "Optional prefix for all bibtex property names. 252 For example setting to `BIB_' would allow interoperability with fireforg." 253 :group 'org-bibtex 254 :version "24.1" 255 :type '(choice 256 (const nil) 257 (string))) 258 259 (defcustom org-bibtex-treat-headline-as-title t 260 "Treat headline text as title if title property is absent. 261 If an entry is missing a title property, use the headline text as 262 the property. If this value is t, `org-bibtex-check' will ignore 263 a missing title field." 264 :group 'org-bibtex 265 :version "24.1" 266 :type 'boolean) 267 268 (defcustom org-bibtex-headline-format-function 269 #'org-bibtex-headline-format-default 270 "Function returning the headline text for `org-bibtex-write'. 271 It should take a single argument, the bibtex entry (an alist as 272 returned by `org-bibtex-read'). The default value simply returns 273 the entry title." 274 :group 'org-bibtex 275 :version "26.1" 276 :package-version '(Org . "9.1") 277 :type 'function) 278 279 (defcustom org-bibtex-export-arbitrary-fields nil 280 "When converting to bibtex allow fields not defined in `org-bibtex-fields'. 281 This only has effect if `org-bibtex-prefix' is defined, so as to 282 ensure that other org-properties, such as CATEGORY or LOGGING are 283 not placed in the exported bibtex entry." 284 :group 'org-bibtex 285 :version "24.1" 286 :type 'boolean) 287 288 (defcustom org-bibtex-key-property "CUSTOM_ID" 289 "Property that holds the bibtex key. 290 By default, this is CUSTOM_ID, which enables easy linking to 291 bibtex headlines from within an org file. This can be set to ID 292 to enable global links, but only with great caution, as global 293 IDs must be unique." 294 :group 'org-bibtex 295 :version "24.1" 296 :type 'string) 297 298 (defcustom org-bibtex-tags nil 299 "List of tag(s) that should be added to new bib entries." 300 :group 'org-bibtex 301 :version "24.1" 302 :type '(repeat :tag "Tag" (string))) 303 304 (defcustom org-bibtex-tags-are-keywords nil 305 "Convert the value of the keywords field to tags and vice versa. 306 307 When non-nil, comma-separated entries in a bibtex entry's keywords 308 field will be converted to Org tags. Note: spaces will be escaped 309 with underscores, and characters that are not permitted in Org 310 tags will be removed. 311 312 When non-nil, local tags in an Org entry will be exported as 313 a comma-separated string of keywords when exported to bibtex. 314 If `org-bibtex-inherit-tags' is non-nil, inherited tags will also 315 be exported as keywords. Tags defined in `org-bibtex-tags' or 316 `org-bibtex-no-export-tags' will not be exported." 317 :group 'org-bibtex 318 :version "24.1" 319 :type 'boolean) 320 321 (defcustom org-bibtex-no-export-tags nil 322 "List of tag(s) that should not be converted to keywords. 323 This variable is relevant only if `org-bibtex-tags-are-keywords' 324 is non-nil." 325 :group 'org-bibtex 326 :version "24.1" 327 :type '(repeat :tag "Tag" (string))) 328 329 (defcustom org-bibtex-inherit-tags nil 330 "Controls whether inherited tags are converted to bibtex keywords. 331 It is relevant only if `org-bibtex-tags-are-keywords' is non-nil. 332 Tag inheritance itself is controlled by `org-use-tag-inheritance' 333 and `org-tags-exclude-from-inheritance'." 334 :group 'org-bibtex 335 :version "26.1" 336 :package-version '(Org . "8.3") 337 :type 'boolean) 338 339 (defcustom org-bibtex-type-property-name "btype" 340 "Property in which to store bibtex entry type (e.g., article)." 341 :group 'org-bibtex 342 :version "24.1" 343 :type 'string) 344 345 346 ;;; Utility functions 347 (defun org-bibtex-get (property) 348 (let ((it (let ((org-special-properties 349 (delete "FILE" (copy-sequence org-special-properties)))) 350 (or 351 (org-entry-get (point) (upcase property)) 352 (org-entry-get (point) (concat org-bibtex-prefix 353 (upcase property))))))) 354 (when it (org-trim it)))) 355 356 (defun org-bibtex-put (property value &optional insert-raw) 357 "Set PROPERTY of headline at point to VALUE. 358 The PROPERTY will be prefixed with `org-bibtex-prefix' when necessary. 359 With non-nil optional argument INSERT-RAW, insert node property string 360 at point." 361 (let* ((prop (upcase (if (keywordp property) 362 (substring (symbol-name property) 1) 363 property))) 364 (prop (concat (unless (string= org-bibtex-key-property prop) 365 org-bibtex-prefix) 366 prop))) 367 (if insert-raw 368 (insert (format ":%s: %s\n" prop value)) 369 (org-set-property prop value)))) 370 371 (defun org-bibtex-headline () 372 "Return a bibtex entry of the given headline as a string." 373 (letrec ((val (lambda (key lst) (cdr (assoc key lst)))) 374 (to (lambda (string) (intern (concat ":" string)))) 375 (from (lambda (key) (substring (symbol-name key) 1))) 376 (flatten (lambda (&rest lsts) 377 (apply #'append (mapcar 378 (lambda (e) 379 (if (listp e) (apply flatten e) (list e))) 380 lsts)))) 381 (id (org-bibtex-get org-bibtex-key-property)) 382 (type (org-bibtex-get org-bibtex-type-property-name)) 383 (tags (when org-bibtex-tags-are-keywords 384 (delq nil 385 (mapcar 386 (lambda (tag) 387 (unless (member tag 388 (append org-bibtex-tags 389 org-bibtex-no-export-tags)) 390 tag)) 391 (if org-bibtex-inherit-tags (org-get-tags) 392 (org-get-tags nil t))))))) 393 (when type 394 (let ((entry (format 395 "@%s{%s,\n%s\n}\n" type id 396 (mapconcat 397 (lambda (pair) 398 (format " %s={%s}" (car pair) (cdr pair))) 399 (remove nil 400 (if (and org-bibtex-export-arbitrary-fields 401 org-bibtex-prefix) 402 (mapcar 403 (lambda (kv) 404 (let ((key (car kv)) (val0 (cdr kv))) 405 (when (and 406 (string-match org-bibtex-prefix key) 407 (not (string= 408 (downcase (concat org-bibtex-prefix 409 org-bibtex-type-property-name)) 410 (downcase key)))) 411 (cons (downcase (replace-regexp-in-string 412 org-bibtex-prefix "" key)) 413 val0)))) 414 (org-entry-properties nil 'standard)) 415 (mapcar 416 (lambda (field) 417 (let ((value (or (org-bibtex-get (funcall from field)) 418 (and (eq :title field) 419 (nth 4 (org-heading-components)))))) 420 (when value (cons (funcall from field) value)))) 421 (funcall flatten 422 (funcall val :required (funcall val (funcall to type) org-bibtex-types)) 423 (funcall val :optional (funcall val (funcall to type) org-bibtex-types)))))) 424 ",\n")))) 425 (with-temp-buffer 426 (insert entry) 427 (when tags 428 (bibtex-beginning-of-entry) 429 (if (re-search-forward "keywords.*=.*{\\(.*\\)}" nil t) 430 (progn (goto-char (match-end 1)) (insert ", ")) 431 (search-forward ",\n" nil t) 432 (insert " keywords={},\n") 433 (search-backward "}," nil t)) 434 (insert (mapconcat #'identity tags ", "))) 435 (buffer-string)))))) 436 437 (defun org-bibtex-ask (field) 438 (unless (assoc field org-bibtex-fields) 439 (error "Field:%s is not known" field)) 440 (save-window-excursion 441 (let* ((name (substring (symbol-name field) 1)) 442 (buf-name (format "*BibTeX Help %s*" name))) 443 (with-output-to-temp-buffer buf-name 444 (princ (cdr (assoc field org-bibtex-fields)))) 445 (with-current-buffer buf-name (visual-line-mode 1)) 446 (org-fit-window-to-buffer (get-buffer-window buf-name)) 447 (let ((result (read-from-minibuffer (format "%s: " name)))) 448 (when (> (length result) 0) result))))) 449 450 (defun org-bibtex-autokey () 451 "Generate an autokey for the current headline." 452 (org-bibtex-put org-bibtex-key-property 453 (if org-bibtex-autogen-keys 454 (let* ((entry (org-bibtex-headline)) 455 (key 456 (with-temp-buffer 457 (insert entry) 458 (bibtex-generate-autokey)))) 459 ;; test for duplicate IDs if using global ID 460 (when (and 461 (equal org-bibtex-key-property "ID") 462 (featurep 'org-id) 463 (hash-table-p org-id-locations) 464 (gethash key org-id-locations)) 465 (warn "Another entry has the same ID")) 466 key) 467 (read-from-minibuffer "id: ")))) 468 469 (defun org-bibtex-fleshout (type &optional optional) 470 "Fleshout current heading, ensuring all required fields are present. 471 With optional argument OPTIONAL, also prompt for optional fields." 472 (let ((val (lambda (key lst) (cdr (assoc key lst)))) 473 (keyword (lambda (name) (intern (concat ":" (downcase name))))) 474 (name (lambda (keyword) (substring (symbol-name keyword) 1)))) 475 (dolist (field (append 476 (if org-bibtex-treat-headline-as-title 477 (remove :title (funcall val :required (funcall val type org-bibtex-types))) 478 (funcall val :required (funcall val type org-bibtex-types))) 479 (when optional (funcall val :optional (funcall val type org-bibtex-types))))) 480 (when (consp field) ; or'd pair of fields e.g., (:editor :author) 481 (let ((present (nth 0 (remove 482 nil 483 (mapcar 484 (lambda (f) 485 (when (org-bibtex-get (funcall name f)) f)) 486 field))))) 487 (setf field (or present (funcall keyword 488 (completing-read 489 "Field: " (mapcar name field))))))) 490 (let ((name (funcall name field))) 491 (unless (org-bibtex-get name) 492 (let ((prop (org-bibtex-ask field))) 493 (when prop (org-bibtex-put name prop))))))) 494 (when (and type (assoc type org-bibtex-types) 495 (not (org-bibtex-get org-bibtex-key-property))) 496 (org-bibtex-autokey))) 497 498 499 ;;; BibTeX link functions 500 (org-link-set-parameters "bibtex" 501 :follow #'org-bibtex-open 502 :store #'org-bibtex-store-link) 503 504 (defun org-bibtex-open (path arg) 505 "Visit the bibliography entry on PATH. 506 ARG, when non-nil, is a universal prefix argument. See 507 `org-open-file' for details." 508 (org-link-open-as-file path arg)) 509 510 (defun org-bibtex-store-link (&optional _interactive?) 511 "Store a link to a BibTeX entry." 512 (when (eq major-mode 'bibtex-mode) 513 (let* ((search (org-create-file-search-in-bibtex)) 514 (link (concat "file:" (abbreviate-file-name buffer-file-name) 515 "::" search)) 516 (entry (mapcar ; repair strings enclosed in "..." or {...} 517 (lambda(c) 518 (if (string-match 519 "^\\(?:{\\|\"\\)\\(.*\\)\\(?:}\\|\"\\)$" (cdr c)) 520 (cons (car c) (match-string 1 (cdr c))) c)) 521 (save-excursion 522 (bibtex-beginning-of-entry) 523 (bibtex-parse-entry))))) 524 (org-link-store-props 525 :key (cdr (assoc "=key=" entry)) 526 :author (or (cdr (assoc "author" entry)) "[no author]") 527 :doi (or (cdr (assoc "doi" entry)) "[no doi]") 528 :editor (or (cdr (assoc "editor" entry)) "[no editor]") 529 :title (or (cdr (assoc "title" entry)) "[no title]") 530 :booktitle (or (cdr (assoc "booktitle" entry)) "[no booktitle]") 531 :journal (or (cdr (assoc "journal" entry)) "[no journal]") 532 :publisher (or (cdr (assoc "publisher" entry)) "[no publisher]") 533 :pages (or (cdr (assoc "pages" entry)) "[no pages]") 534 :url (or (cdr (assoc "url" entry)) "[no url]") 535 :year (or (cdr (assoc "year" entry)) "[no year]") 536 :month (or (cdr (assoc "month" entry)) "[no month]") 537 :address (or (cdr (assoc "address" entry)) "[no address]") 538 :volume (or (cdr (assoc "volume" entry)) "[no volume]") 539 :number (or (cdr (assoc "number" entry)) "[no number]") 540 :annote (or (cdr (assoc "annote" entry)) "[no annotation]") 541 :series (or (cdr (assoc "series" entry)) "[no series]") 542 :abstract (or (cdr (assoc "abstract" entry)) "[no abstract]") 543 :btype (or (cdr (assoc "=type=" entry)) "[no type]") 544 :type "bibtex" 545 :link link 546 :description org-bibtex-description)))) 547 548 (defun org-create-file-search-in-bibtex () 549 "Create the search string and description for a BibTeX database entry." 550 ;; Make a good description for this entry, using names, year and the title 551 ;; Put it into the `description' variable which is dynamically scoped. 552 (let ((bibtex-autokey-names 1) 553 (bibtex-autokey-names-stretch 1) 554 (bibtex-autokey-name-case-convert-function 'identity) 555 (bibtex-autokey-name-separator " & ") 556 (bibtex-autokey-additional-names " et al.") 557 (bibtex-autokey-year-length 4) 558 (bibtex-autokey-name-year-separator " ") 559 (bibtex-autokey-titlewords 3) 560 (bibtex-autokey-titleword-separator " ") 561 (bibtex-autokey-titleword-case-convert-function 'identity) 562 (bibtex-autokey-titleword-length 'infty) 563 (bibtex-autokey-year-title-separator ": ")) 564 (setq org-bibtex-description (bibtex-generate-autokey))) 565 ;; Now parse the entry, get the key and return it. 566 (save-excursion 567 (bibtex-beginning-of-entry) 568 (cdr (assoc "=key=" (bibtex-parse-entry))))) 569 570 (defun org-execute-file-search-in-bibtex (s) 571 "Find the link search string S as a key for a database entry." 572 (when (eq major-mode 'bibtex-mode) 573 ;; Yes, we want to do the search in this file. 574 ;; We construct a regexp that searches for "@entrytype{" followed by the key 575 (goto-char (point-min)) 576 (and (re-search-forward (concat "@[a-zA-Z]+[ \t\n]*{[ \t\n]*" 577 (regexp-quote s) "[ \t\n]*,") 578 nil t) 579 (goto-char (match-beginning 0))) 580 (if (and (match-beginning 0) (equal current-prefix-arg '(16))) 581 ;; Use double prefix to indicate that any web link should be browsed 582 (let ((b (current-buffer)) (p (point))) 583 ;; Restore the window configuration because we just use the web link 584 (set-window-configuration org-window-config-before-follow-link) 585 (with-current-buffer b 586 (goto-char p) 587 (bibtex-url))) 588 (recenter 0)) ; Move entry start to beginning of window 589 ;; return t to indicate that the search is done. 590 t)) 591 592 ;; Finally add the link search function to the right hook. 593 (add-hook 'org-execute-file-search-functions 'org-execute-file-search-in-bibtex) 594 595 596 ;;; BibTeX <-> Org headline translation functions 597 (defun org-bibtex (filename) 598 "Export each headline in the current file to a bibtex entry. 599 Headlines are exported using `org-bibtex-headline'." 600 (interactive 601 (list (read-file-name 602 "BibTeX file: " nil nil nil 603 (let ((file (buffer-file-name (buffer-base-buffer)))) 604 (and file 605 (file-name-nondirectory 606 (concat (file-name-sans-extension file) ".bib"))))))) 607 (let ((error-point 608 (catch 'bib 609 (let ((bibtex-entries 610 (remove nil (org-map-entries 611 (lambda () 612 (condition-case nil 613 (org-bibtex-headline) 614 (error (throw 'bib (point))))))))) 615 (with-temp-file filename 616 (insert (mapconcat #'identity bibtex-entries "\n"))) 617 (message "Successfully exported %d BibTeX entries to %s" 618 (length bibtex-entries) filename) 619 nil)))) 620 (when error-point 621 (goto-char error-point) 622 (message "BibTeX error at %S" (nth 4 (org-heading-components)))))) 623 624 (defun org-bibtex-check (&optional optional) 625 "Check the current headline for required fields. 626 With prefix argument OPTIONAL also prompt for optional fields." 627 (interactive "P") 628 (save-restriction 629 (org-narrow-to-subtree) 630 (let ((type (let ((name (org-bibtex-get org-bibtex-type-property-name))) 631 (when name (intern (concat ":" name)))))) 632 (when type (org-bibtex-fleshout type optional))))) 633 634 (defun org-bibtex-check-all (&optional optional) 635 "Check all headlines in the current file. 636 With prefix argument OPTIONAL also prompt for optional fields." 637 (interactive) (org-map-entries (lambda () (org-bibtex-check optional)))) 638 639 (defun org-bibtex-headline-format-default (entry) 640 "Return headline text according to ENTRY title." 641 (cdr (assq :title entry))) 642 643 (defun org-bibtex-create (&optional arg update-heading) 644 "Create a new entry at the given level. 645 With a prefix ARG, query for optional fields as well. 646 If UPDATE-HEADING is non-nil, add data to the headline of the entry at 647 point." 648 (interactive "P") 649 (let* ((type (completing-read 650 "Type: " (mapcar (lambda (type) 651 (substring (symbol-name (car type)) 1)) 652 org-bibtex-types) 653 nil nil (when update-heading 654 (org-bibtex-get org-bibtex-type-property-name)))) 655 (type (if (keywordp type) type (intern (concat ":" type)))) 656 (org-bibtex-treat-headline-as-title (if update-heading nil t))) 657 (unless (assoc type org-bibtex-types) 658 (error "Type:%s is not known" type)) 659 (if update-heading 660 (org-back-to-heading) 661 (org-insert-heading) 662 (let ((title (org-bibtex-ask :title))) 663 (insert title) 664 (org-bibtex-put "TITLE" title))) 665 (org-bibtex-put org-bibtex-type-property-name 666 (substring (symbol-name type) 1)) 667 (org-bibtex-fleshout type arg) 668 (dolist (tag org-bibtex-tags) (org-toggle-tag tag 'on)))) 669 670 (defun org-bibtex-create-in-current-entry (&optional arg) 671 "Add bibliographical data to the current entry. 672 With a prefix arg, query for optional fields." 673 (interactive "P") 674 (org-bibtex-create arg t)) 675 676 (defun org-bibtex-read () 677 "Read a bibtex entry and save to `org-bibtex-entries'. 678 This uses `bibtex-parse-entry'. 679 Return the new value of `org-bibtex-entries'." 680 (interactive) 681 (let ((keyword (lambda (str) (intern (concat ":" (downcase str))))) 682 (clean-space (lambda (str) (replace-regexp-in-string 683 "[[:space:]\n\r]+" " " str))) 684 (strip-delim 685 (lambda (str) ; strip enclosing "..." and {...} 686 (dolist (pair '((34 . 34) (123 . 125))) 687 (when (and (> (length str) 1) 688 (= (aref str 0) (car pair)) 689 (= (aref str (1- (length str))) (cdr pair))) 690 (setf str (substring str 1 (1- (length str)))))) 691 str))) 692 (push (mapcar 693 (lambda (pair) 694 (cons (let ((field (funcall keyword (car pair)))) 695 (pcase field 696 (:=type= :type) 697 (:=key= :key) 698 (_ field))) 699 (funcall clean-space (funcall strip-delim (cdr pair))))) 700 (save-excursion (bibtex-beginning-of-entry) (bibtex-parse-entry))) 701 org-bibtex-entries) 702 (unless (car org-bibtex-entries) (pop org-bibtex-entries)) 703 org-bibtex-entries)) 704 705 (defun org-bibtex-read-buffer (buffer) 706 "Read all bibtex entries in BUFFER and save to `org-bibtex-entries'. 707 Return the number of saved entries." 708 (interactive "bBuffer: ") 709 (let ((start-length (length org-bibtex-entries))) 710 (with-current-buffer buffer 711 (save-excursion 712 (goto-char (point-max)) 713 (while (not (= (point) (point-min))) 714 (backward-char 1) 715 (org-bibtex-read) 716 (bibtex-beginning-of-entry)))) 717 (let ((added (- (length org-bibtex-entries) start-length))) 718 (message "Parsed %d entries" added) 719 added))) 720 721 (defun org-bibtex-read-file (file) 722 "Read FILE with `org-bibtex-read-buffer'." 723 (interactive "fFile: ") 724 (org-bibtex-read-buffer (find-file-noselect file 'nowarn 'rawfile))) 725 726 (defun org-bibtex-write (&optional noindent update-heading) 727 "Insert a heading built from the first element of `org-bibtex-entries'. 728 When optional argument NOINDENT is non-nil, do not indent the properties 729 drawer. If UPDATE-HEADING is non-nil, add data to the headline of the 730 entry at point." 731 (interactive) 732 (unless org-bibtex-entries 733 (error "No entries in `org-bibtex-entries'")) 734 (let* ((entry (pop org-bibtex-entries)) 735 (org-special-properties nil) ; avoids errors with `org-entry-put' 736 (val (lambda (field) (cdr (assoc field entry)))) 737 (togtag (lambda (tag) (org-toggle-tag tag 'on))) 738 (insert-raw (not update-heading))) 739 (unless update-heading 740 (org-insert-heading) 741 (insert (funcall org-bibtex-headline-format-function entry)) 742 (insert "\n:PROPERTIES:\n")) 743 (org-bibtex-put "TITLE" (funcall val :title) insert-raw) 744 (org-bibtex-put org-bibtex-type-property-name 745 (downcase (funcall val :type)) 746 insert-raw) 747 (dolist (pair entry) 748 (pcase (car pair) 749 (:title nil) 750 (:type nil) 751 (:key (org-bibtex-put org-bibtex-key-property (cdr pair) insert-raw)) 752 (:keywords (if org-bibtex-tags-are-keywords 753 (dolist (kw (split-string (cdr pair) ", *")) 754 (funcall 755 togtag 756 (replace-regexp-in-string 757 "[^[:alnum:]_@#%]" "" 758 (replace-regexp-in-string "[ \t]+" "_" kw)))) 759 (org-bibtex-put (car pair) (cdr pair) insert-raw))) 760 (_ (org-bibtex-put (car pair) (cdr pair) insert-raw)))) 761 (unless update-heading 762 (insert ":END:\n")) 763 (mapc togtag org-bibtex-tags) 764 (unless noindent 765 (org-indent-region 766 (save-excursion (org-back-to-heading t) (point)) 767 (point))))) 768 769 (defun org-bibtex-yank (&optional update-heading) 770 "If kill ring holds a bibtex entry yank it as an Org headline. 771 When called with non-nil prefix argument UPDATE-HEADING, add data to the 772 headline of the entry at point." 773 (interactive "P") 774 (let (entry) 775 (with-temp-buffer 776 (yank 1) 777 (bibtex-mode) 778 (setf entry (org-bibtex-read))) 779 (if entry 780 (org-bibtex-write nil update-heading) 781 (error "Yanked text does not appear to contain a BibTeX entry")))) 782 783 (defun org-bibtex-import-from-file (file) 784 "Read bibtex entries from FILE and insert as Org headlines after point." 785 (interactive "fFile: ") 786 (let ((pos (point))) 787 (dotimes (_ (org-bibtex-read-file file)) 788 (save-excursion (org-bibtex-write 'noindent)) 789 (re-search-forward org-property-end-re) 790 (insert "\n")) 791 (org-indent-region pos (point)))) 792 793 (defun org-bibtex-export-to-kill-ring () 794 "Export current headline to kill ring as bibtex entry." 795 (interactive) 796 (let ((result (org-bibtex-headline))) 797 (kill-new result) result)) 798 799 (defun org-bibtex-search (string) 800 "Search for bibliographical entries in agenda files. 801 This function relies `org-search-view' to locate results." 802 (interactive "sSearch string: ") 803 (let ((org-agenda-overriding-header "Bib search results:") 804 (org-agenda-search-view-always-boolean t)) 805 (org-search-view nil 806 (format "%s +{:%s%s:}" 807 string (or org-bibtex-prefix "") 808 org-bibtex-type-property-name)))) 809 810 (provide 'ol-bibtex) 811 812 ;;; ol-bibtex.el ends here